Tpetra: undefined reference to GEMM
Created by: ibaned
@trilinos/tpetra
The Albany dashboard shows the following this morning:
http://my.cdash.org/viewBuildError.php?buildid=1165207
libtpetra.so.12.11: undefined reference to `Teuchos::BLAS >::GEMM(Teuchos::ETransp, Teuchos::ETransp, int, int, int, std::complex, std::complex const*, int, std::complex const*, int, std::complex, std::complex*, int) const
I'm almost certain this is caused by either commit 9ff51680 or cbdd2f45.
Here is our Trilinos config:
"/users/ghansen/bin/cmake" "-DTPL_ENABLE_MPI:BOOL=ON" "-DMPI_BASE_DIR:PATH=/users/ghansen/ompi-gcc" "-DBUILD_SHARED_LIBS:BOOL=ON" "-DTrilinos_ENABLE_ROL:BOOL=ON" "-DCMAKE_CXX_COMPILER:PATH=/users/ghansen/ompi-gcc/bin/mpicxx" "-DCMAKE_CXX_FLAGS:STRING='-O3 -march=native '" "-DCMAKE_C_COMPILER:PATH=/users/ghansen/ompi-gcc/bin/mpicc" "-DCMAKE_C_FLAGS:STRING='-O3 -march=native'" "-DCMAKE_Fortran_COMPILER:PATH=/users/ghansen/ompi-gcc/bin/mpifort" "-DCMAKE_Fortran_FLAGS:STRING='-O3 -march=native'" "-DTrilinos_ENABLE_SCOREC:BOOL=ON" "-DSCOREC_DISABLE_STRONG_WARNINGS:BOOL=ON" "-DCMAKE_INSTALL_PREFIX:PATH=/users/mperego/nightly/build/TrilinosInstall" "-Wno-dev" "-DCMAKE_BUILD_TYPE:STRING=NONE" "-DTrilinos_ENABLE_ThyraTpetraAdapters:BOOL=ON" "-DTrilinos_ENABLE_Ifpack2:BOOL=ON" "-DTrilinos_ENABLE_Amesos2:BOOL=ON" "-DTrilinos_ENABLE_Zoltan2:BOOL=ON" "-DTrilinos_ENABLE_MueLu:BOOL=ON" "-DZoltan_ENABLE_ULONG_IDS:BOOL=ON" "-DTeuchos_ENABLE_LONG_LONG_INT:BOOL=ON" "-DTeuchos_ENABLE_COMPLEX:BOOL=OFF" "-DZOLTAN_BUILD_ZFDRIVE:BOOL=OFF" "-DTPL_Netcdf_PARALLEL:BOOL=ON" "-DSEACAS_ENABLE_SEACASSVDI:BOOL=OFF" "-DTrilinos_ENABLE_SEACASFastq:BOOL=OFF" "-DTrilinos_ENABLE_SEACASBlot:BOOL=OFF" "-DTrilinos_ENABLE_SEACASPLT:BOOL=OFF" "-DTPL_ENABLE_X11:BOOL=OFF" "-DTPL_ENABLE_Matio:BOOL=OFF" "-DCMAKE_VERBOSE_MAKEFILE:BOOL=OFF" "-DTrilinos_VERBOSE_CONFIGURE:BOOL=OFF" "-DTPL_ENABLE_Boost:BOOL=ON" "-DTPL_ENABLE_BoostLib:BOOL=ON" "-DTPL_ENABLE_BoostAlbLib:BOOL=ON" "-DBoost_INCLUDE_DIRS:PATH=/users/mperego/TPL/boost_1_60_0/install/include" "-DBoost_LIBRARY_DIRS:PATH=/users/mperego/TPL/boost_1_60_0/install/lib" "-DBoostLib_INCLUDE_DIRS:PATH=/users/mperego/TPL/boost_1_60_0/install/include" "-DBoostLib_LIBRARY_DIRS:PATH=/users/mperego/TPL/boost_1_60_0/install/lib" "-DBoostAlbLib_INCLUDE_DIRS:PATH=/users/mperego/TPL/boost_1_60_0/install/include" "-DBoostAlbLib_LIBRARY_DIRS:PATH=/users/mperego/TPL/boost_1_60_0/install/lib" "-DTPL_ENABLE_Netcdf:STRING=ON" "-DTPL_Netcdf_INCLUDE_DIRS:PATH=/users/ghansen/include" "-DTPL_Netcdf_LIBRARIES=/users/ghansen/lib/libnetcdf.a" "-DTPL_ENABLE_Pnetcdf:STRING=ON" "-DTPL_Pnetcdf_INCLUDE_DIRS:PATH=/users/ghansen/include" "-DTPL_Pnetcdf_LIBRARIES=/users/ghansen/lib/libnetcdf.a" "-DTPL_ENABLE_HDF5:STRING=ON" "-DTPL_HDF5_INCLUDE_DIRS:PATH=/users/ghansen/include" "-DTPL_HDF5_LIBRARIES=/users/ghansen/lib/libhdf5_hl.a" "-DTrilinos_EXTRA_LINK_FLAGS:STRING='-L/users/ghansen/lib -lnetcdf -lpnetcdf -lhdf5_hl -lhdf5 -lz -lcurl -ldl'" "-DTPL_ENABLE_Zlib:STRING=ON" "-DZlib_INCLUDE_DIRS:PATH=/users/ghansen/include" "-DZlib_LIBRARY_DIRS:PATH=/users/ghansen/lib" "-DTPL_ENABLE_ParMETIS:STRING=ON" "-DParMETIS_INCLUDE_DIRS:PATH=/users/ghansen/include" "-DParMETIS_LIBRARY_DIRS:PATH=/users/ghansen/lib" "-DTPL_ENABLE_SuperLU:STRING=ON" "-DSuperLU_INCLUDE_DIRS:PATH=/users/ghansen/SuperLU_4.3/include" "-DSuperLU_LIBRARY_DIRS:PATH=/users/ghansen/SuperLU_4.3/lib" "-DTPL_BLAS_LIBRARIES:STRING='-L/usr/local/intel/11.1/069/mkl/lib/em64t -lmkl_intel_lp64 -lmkl_blas95_lp64 -lmkl_core -lmkl_sequential'" "-DTPL_LAPACK_LIBRARIES:STRING='-L/usr/local/intel/11.1/069/mkl/lib/em64t -lmkl_lapack95_lp64'" "-DDART_TESTING_TIMEOUT:STRING=600" "-DTrilinos_ENABLE_ThreadPool:BOOL=ON" "-DTrilinos_ENABLE_Kokkos:BOOL=ON" "-DTrilinos_ENABLE_KokkosCore:BOOL=ON" "-DPhalanx_KOKKOS_DEVICE_TYPE:STRING=SERIAL" "-DPhalanx_INDEX_SIZE_TYPE:STRING=INT" "-DPhalanx_SHOW_DEPRECATED_WARNINGS:BOOL=OFF" "-DKokkos_ENABLE_Serial:BOOL=ON" "-DKokkos_ENABLE_OpenMP:BOOL=OFF" "-DKokkos_ENABLE_Pthread:BOOL=OFF" "-DTrilinos_ENABLE_TESTS:BOOL=OFF" "-DTrilinos_ENABLE_TriKota:BOOL=OFF" "-DTrilinos_ENABLE_EXPORT_MAKEFILES:BOOL=OFF" "-DTrilinos_ASSERT_MISSING_PACKAGES:BOOL=OFF" "-DTrilinos_ENABLE_ALL_PACKAGES:BOOL=OFF" "-DTrilinos_ENABLE_ALL_OPTIONAL_PACKAGES:BOOL=OFF" "-DTrilinos_ENABLE_SECONDARY_TESTED_CODE:BOOL=ON" "-DTrilinos_ENABLE_Teuchos:BOOL=ON" "-DTrilinos_ENABLE_Shards:BOOL=ON" "-DTrilinos_ENABLE_Sacado:BOOL=ON" "-DTrilinos_ENABLE_Epetra:BOOL=ON" "-DTrilinos_ENABLE_EpetraExt:BOOL=ON" "-DTrilinos_ENABLE_Ifpack:BOOL=ON" "-DTrilinos_ENABLE_AztecOO:BOOL=ON" "-DTrilinos_ENABLE_Amesos:BOOL=ON" "-DTrilinos_ENABLE_Anasazi:BOOL=ON" "-DTrilinos_ENABLE_Belos:BOOL=ON" "-DTrilinos_ENABLE_ML:BOOL=ON" "-DTrilinos_ENABLE_Phalanx:BOOL=ON" "-DTrilinos_ENABLE_Intrepid2:BOOL=ON" "-DTrilinos_ENABLE_MiniTensor:BOOL=ON" "-DTrilinos_ENABLE_NOX:BOOL=ON" "-DTrilinos_ENABLE_Stratimikos:BOOL=ON" "-DTrilinos_ENABLE_Thyra:BOOL=ON" "-DTrilinos_ENABLE_Rythmos:BOOL=ON" "-DTrilinos_ENABLE_OptiPack:BOOL=ON" "-DTrilinos_ENABLE_GlobiPack:BOOL=ON" "-DTrilinos_ENABLE_Stokhos:BOOL=ON" "-DTrilinos_ENABLE_Isorropia:BOOL=ON" "-DTrilinos_ENABLE_Piro:BOOL=ON" "-DTrilinos_ENABLE_Teko:BOOL=ON" "-DTrilinos_ENABLE_Zoltan:BOOL=ON" "-DTrilinos_ENABLE_FEI:BOOL=OFF" "-DPhalanx_ENABLE_TEUCHOS_TIME_MONITOR:BOOL=ON" "-DStokhos_ENABLE_TEUCHOS_TIME_MONITOR:BOOL=ON" "-DStratimikos_ENABLE_TEUCHOS_TIME_MONITOR:BOOL=ON" "-DTrilinos_ENABLE_SEACAS:BOOL=ON" "-DTrilinos_ENABLE_Pamgen:BOOL=ON" "-DTrilinos_ENABLE_PyTrilinos:BOOL=OFF" "-DTrilinos_ENABLE_STK:BOOL=ON" "-DTrilinos_ENABLE_STKClassic:BOOL=OFF" "-DTrilinos_ENABLE_STKUtil:BOOL=ON" "-DTrilinos_ENABLE_STKTopology:BOOL=ON" "-DTrilinos_ENABLE_STKMesh:BOOL=ON" "-DTrilinos_ENABLE_STKIO:BOOL=ON" "-DTrilinos_ENABLE_STKExp:BOOL=OFF" "-DTrilinos_ENABLE_STKTransfer:BOOL=ON" "-DTrilinos_ENABLE_STKSearch:BOOL=ON" "-DTrilinos_ENABLE_STKUnit_tests:BOOL=OFF" "-DTrilinos_ENABLE_STKDoc_tests:BOOL=OFF" "-DTPL_ENABLE_yaml-cpp:BOOL=ON" "-Dyaml-cpp_INCLUDE_DIRS:PATH=/users/mperego/TPL/yaml/build/install/include" "-Dyaml-cpp_LIBRARY_DIRS:PATH=/users/mperego/TPL/yaml/build/install/lib" "-GUnix Makefiles" "/users/mperego/nightly/repos/Trilinos"