Kokkos, Panzer, STK, Teuchos, Thyra, Tpetra: Some files overridden on install
Created by: nschloe
On a "full" Trilinos configuration
cmake \
-DTrilinos_LIBRARY_NAME_PREFIX:STRING="trilinos_" \
-DCMAKE_INSTALL_PREFIX:PATH=/opt/trilinos/full/ \
-DCMAKE_BUILD_TYPE:STRING=Debug \
-DCMAKE_SKIP_RPATH:BOOL=ON \
-DBUILD_SHARED_LIBS:BOOL=ON \
-DTrilinos_INSTALL_INCLUDE_DIR:PATH=include/trilinos/ \
-DTrilinos_USE_GNUINSTALLDIRS:BOOL=ON \
-DTrilinos_ENABLE_ALL_PACKAGES:BOOL=ON \
-DTrilinos_ENABLE_SECONDARY_STABLE_CODE:BOOL=ON \
-DTrilinos_ENABLE_PyTrilinos:BOOL=OFF \
-DSEACASExodus_ENABLE_MPI:BOOL=OFF \
-DTPL_ENABLE_BinUtils:BOOL=ON \
-DTPL_ENABLE_Boost:BOOL=ON \
-DTPL_ENABLE_HDF5:BOOL=OFF \
-DTPL_ENABLE_Matio:BOOL=OFF \
-DTPL_ENABLE_MATLAB:BOOL=OFF \
-DTPL_ENABLE_MPI:BOOL=ON \
-DTPL_ENABLE_MUMPS:BOOL=ON \
-DTPL_ENABLE_ParMETIS:BOOL=OFF \
-DTPL_ENABLE_Scotch:BOOL=ON \
-DTPL_Scotch_INCLUDE_DIRS:PATH=/usr/include/scotch/ \
-DTPL_ENABLE_TBB:BOOL=ON \
-DTPL_ENABLE_X11:BOOL=OFF \
-DTPL_ENABLE_Zlib:BOOL=ON \
../../source-upstream/
there a many files which are installed "twice", i.e., make install
creates more than one file with the same name in the same location, effectively overriding everything that wasn't installed last. This may lead to serious bugs. For the above configuration, one gets
$ sort install_manifest.txt | uniq --count --repeated
2 /opt/trilinos/full/include/trilinos/KokkosCompat_ClassicNodeAPI_Wrapper.hpp
2 /opt/trilinos/full/include/trilinos/KokkosCompat_TMM.hpp
2 /opt/trilinos/full/include/trilinos/KokkosCompat_View_def.hpp
2 /opt/trilinos/full/include/trilinos/KokkosCompat_View.hpp
2 /opt/trilinos/full/include/trilinos/MueLu_AdaptiveSaMLParameterListInterpreter.hpp
2 /opt/trilinos/full/include/trilinos/MueLu_config.hpp
2 /opt/trilinos/full/include/trilinos/MueLu_FactoryFactory.hpp
2 /opt/trilinos/full/include/trilinos/MueLu_MLParameterListInterpreter.hpp
2 /opt/trilinos/full/include/trilinos/MueLu_ParameterListInterpreter.hpp
2 /opt/trilinos/full/include/trilinos/MueLu_RefMaxwell.hpp
2 /opt/trilinos/full/include/trilinos/MueLu_ShiftedLaplacian.hpp
2 /opt/trilinos/full/include/trilinos/MueLu_ShiftedLaplacianOperator.hpp
2 /opt/trilinos/full/include/trilinos/MueLu_TpetraOperator.hpp
2 /opt/trilinos/full/include/trilinos/Panzer_config.hpp
3 /opt/trilinos/full/include/trilinos/STKClassic_config.h
2 /opt/trilinos/full/include/trilinos/stk_io/IossBridge.hpp
2 /opt/trilinos/full/include/trilinos/stk_io/util/Gears.hpp
2 /opt/trilinos/full/include/trilinos/stk_io/util/Gmesh_STKmesh_Fixture.hpp
2 /opt/trilinos/full/include/trilinos/stk_mesh/base/Bucket.hpp
2 /opt/trilinos/full/include/trilinos/stk_mesh/base/BulkData.hpp
2 /opt/trilinos/full/include/trilinos/stk_mesh/base/BulkModification.hpp
2 /opt/trilinos/full/include/trilinos/stk_mesh/base/Comm.hpp
2 /opt/trilinos/full/include/trilinos/stk_mesh/base/DataTraitsClass.hpp
2 /opt/trilinos/full/include/trilinos/stk_mesh/base/DataTraitsEnum.hpp
2 /opt/trilinos/full/include/trilinos/stk_mesh/base/DataTraits.hpp
2 /opt/trilinos/full/include/trilinos/stk_mesh/base/Entity.hpp
2 /opt/trilinos/full/include/trilinos/stk_mesh/base/EntityKey.hpp
2 /opt/trilinos/full/include/trilinos/stk_mesh/base/FieldBase.hpp
2 /opt/trilinos/full/include/trilinos/stk_mesh/base/Field.hpp
2 /opt/trilinos/full/include/trilinos/stk_mesh/base/FieldParallel.hpp
2 /opt/trilinos/full/include/trilinos/stk_mesh/base/FieldRelation.hpp
2 /opt/trilinos/full/include/trilinos/stk_mesh/base/FieldRestriction.hpp
2 /opt/trilinos/full/include/trilinos/stk_mesh/base/FieldState.hpp
2 /opt/trilinos/full/include/trilinos/stk_mesh/base/FieldTraits.hpp
2 /opt/trilinos/full/include/trilinos/stk_mesh/base/FindRestriction.hpp
2 /opt/trilinos/full/include/trilinos/stk_mesh/base/GetBuckets.hpp
2 /opt/trilinos/full/include/trilinos/stk_mesh/base/GetEntities.hpp
2 /opt/trilinos/full/include/trilinos/stk_mesh/base/Ghosting.hpp
2 /opt/trilinos/full/include/trilinos/stk_mesh/baseImpl/BucketRepository.hpp
2 /opt/trilinos/full/include/trilinos/stk_mesh/baseImpl/EntityRepository.hpp
2 /opt/trilinos/full/include/trilinos/stk_mesh/baseImpl/FieldBaseImpl.hpp
2 /opt/trilinos/full/include/trilinos/stk_mesh/baseImpl/FieldRepository.hpp
2 /opt/trilinos/full/include/trilinos/stk_mesh/baseImpl/PartImpl.hpp
2 /opt/trilinos/full/include/trilinos/stk_mesh/baseImpl/PartRepository.hpp
2 /opt/trilinos/full/include/trilinos/stk_mesh/base/Iterators.hpp
2 /opt/trilinos/full/include/trilinos/stk_mesh/base/MemoryUsage.hpp
2 /opt/trilinos/full/include/trilinos/stk_mesh/base/MetaData.hpp
2 /opt/trilinos/full/include/trilinos/stk_mesh/base/Part.hpp
2 /opt/trilinos/full/include/trilinos/stk_mesh/base/PropertyBase.hpp
2 /opt/trilinos/full/include/trilinos/stk_mesh/base/Property.hpp
2 /opt/trilinos/full/include/trilinos/stk_mesh/base/Relation.hpp
2 /opt/trilinos/full/include/trilinos/stk_mesh/base/Selector.hpp
2 /opt/trilinos/full/include/trilinos/stk_mesh/base/SetOwners.hpp
2 /opt/trilinos/full/include/trilinos/stk_mesh/base/Types.hpp
2 /opt/trilinos/full/include/trilinos/stk_search/BoundingBox.hpp
2 /opt/trilinos/full/include/trilinos/stk_search/CoarseSearch.hpp
2 /opt/trilinos/full/include/trilinos/stk_search/IdentProc.hpp
2 /opt/trilinos/full/include/trilinos/stk_search/OctTree.hpp
2 /opt/trilinos/full/include/trilinos/stk_search/OctTreeOps.hpp
2 /opt/trilinos/full/include/trilinos/stk_search/SearchTypes.hpp
2 /opt/trilinos/full/include/trilinos/stk_util/diag/Mapv.hpp
2 /opt/trilinos/full/include/trilinos/stk_util/diag/Option.hpp
2 /opt/trilinos/full/include/trilinos/stk_util/diag/Platform.hpp
2 /opt/trilinos/full/include/trilinos/stk_util/diag/PrintTable.hpp
2 /opt/trilinos/full/include/trilinos/stk_util/diag/PrintTimer.hpp
2 /opt/trilinos/full/include/trilinos/stk_util/diag/SlibDiagWriter.hpp
2 /opt/trilinos/full/include/trilinos/stk_util/diag/String.hpp
2 /opt/trilinos/full/include/trilinos/stk_util/diag/StringUtil.hpp
2 /opt/trilinos/full/include/trilinos/stk_util/diag/Timer.hpp
2 /opt/trilinos/full/include/trilinos/stk_util/diag/TimerMetricTraits.hpp
2 /opt/trilinos/full/include/trilinos/stk_util/diag/WriterExt.hpp
2 /opt/trilinos/full/include/trilinos/stk_util/diag/WriterOStream.hpp
2 /opt/trilinos/full/include/trilinos/stk_util/diag/WriterParser.hpp
2 /opt/trilinos/full/include/trilinos/stk_util/diag/WriterRegistry.hpp
2 /opt/trilinos/full/include/trilinos/stk_util/environment/CPUTime.hpp
2 /opt/trilinos/full/include/trilinos/stk_util/environment/FormatMemorySize.hpp
2 /opt/trilinos/full/include/trilinos/stk_util/environment/FormatTime.hpp
2 /opt/trilinos/full/include/trilinos/stk_util/environment/LogControl.hpp
2 /opt/trilinos/full/include/trilinos/stk_util/environment/OutputLog.hpp
2 /opt/trilinos/full/include/trilinos/stk_util/environment/ProgramOptions.hpp
2 /opt/trilinos/full/include/trilinos/stk_util/environment/ReportHandler.hpp
2 /opt/trilinos/full/include/trilinos/stk_util/environment/RuntimeDoomed.hpp
2 /opt/trilinos/full/include/trilinos/stk_util/environment/RuntimeMessage.hpp
2 /opt/trilinos/full/include/trilinos/stk_util/environment/RuntimeWarning.hpp
2 /opt/trilinos/full/include/trilinos/stk_util/environment/WallTime.hpp
2 /opt/trilinos/full/include/trilinos/stk_util/parallel/BroadcastArg.hpp
2 /opt/trilinos/full/include/trilinos/stk_util/parallel/DistributedIndex.hpp
2 /opt/trilinos/full/include/trilinos/stk_util/parallel/MPI.hpp
2 /opt/trilinos/full/include/trilinos/stk_util/parallel/ParallelComm.hpp
2 /opt/trilinos/full/include/trilinos/stk_util/parallel/Parallel.hpp
2 /opt/trilinos/full/include/trilinos/stk_util/parallel/ParallelIndex.hpp
2 /opt/trilinos/full/include/trilinos/stk_util/parallel/ParallelInputStream.hpp
2 /opt/trilinos/full/include/trilinos/stk_util/parallel/ParallelReduce.hpp
2 /opt/trilinos/full/include/trilinos/stk_util/stk_config.h
2 /opt/trilinos/full/include/trilinos/stk_util/util/Array.hpp
2 /opt/trilinos/full/include/trilinos/stk_util/util/Bootstrap.hpp
2 /opt/trilinos/full/include/trilinos/stk_util/util/Callback.hpp
2 /opt/trilinos/full/include/trilinos/stk_util/util/ci_string.hpp
2 /opt/trilinos/full/include/trilinos/stk_util/util/ci_traits.hpp
2 /opt/trilinos/full/include/trilinos/stk_util/util/config_google.h
2 /opt/trilinos/full/include/trilinos/stk_util/util/CSet.hpp
2 /opt/trilinos/full/include/trilinos/stk_util/util/densehashtable.h
2 /opt/trilinos/full/include/trilinos/stk_util/util/FeatureTest.hpp
2 /opt/trilinos/full/include/trilinos/stk_util/util/Foreach.hpp
2 /opt/trilinos/full/include/trilinos/stk_util/util/Fortran.hpp
2 /opt/trilinos/full/include/trilinos/stk_util/util/hashtable-common.h
2 /opt/trilinos/full/include/trilinos/stk_util/util/IndentStreambuf.hpp
2 /opt/trilinos/full/include/trilinos/stk_util/util/IndexList.hpp
2 /opt/trilinos/full/include/trilinos/stk_util/util/libc_allocator_with_realloc.h
2 /opt/trilinos/full/include/trilinos/stk_util/util/MallocUsed.h
2 /opt/trilinos/full/include/trilinos/stk_util/util/Marshal.hpp
2 /opt/trilinos/full/include/trilinos/stk_util/util/NamedPair.hpp
2 /opt/trilinos/full/include/trilinos/stk_util/util/nested_iterator.hpp
2 /opt/trilinos/full/include/trilinos/stk_util/util/nested_range.hpp
2 /opt/trilinos/full/include/trilinos/stk_util/util/Null_Streambuf.hpp
2 /opt/trilinos/full/include/trilinos/stk_util/util/PairIter.hpp
2 /opt/trilinos/full/include/trilinos/stk_util/util/Pool.hpp
2 /opt/trilinos/full/include/trilinos/stk_util/util/RadixSort.hpp
2 /opt/trilinos/full/include/trilinos/stk_util/util/random_access_iterator_wrapper.hpp
2 /opt/trilinos/full/include/trilinos/stk_util/util/Range.hpp
2 /opt/trilinos/full/include/trilinos/stk_util/util/SameType.hpp
2 /opt/trilinos/full/include/trilinos/stk_util/util/SimpleArrayOps.hpp
2 /opt/trilinos/full/include/trilinos/stk_util/util/sparseconfig.h
2 /opt/trilinos/full/include/trilinos/stk_util/util/sparsehashtable.h
2 /opt/trilinos/full/include/trilinos/stk_util/util/StaticAssert.hpp
2 /opt/trilinos/full/include/trilinos/stk_util/util/string_case_compare.hpp
2 /opt/trilinos/full/include/trilinos/stk_util/util/TeeStreambuf.hpp
2 /opt/trilinos/full/include/trilinos/stk_util/util/tokenize.hpp
2 /opt/trilinos/full/include/trilinos/stk_util/util/TypeList.hpp
2 /opt/trilinos/full/include/trilinos/stk_util/util/TypeListMap.hpp
2 /opt/trilinos/full/include/trilinos/stk_util/util/type_traits_google.h
2 /opt/trilinos/full/include/trilinos/stk_util/util/TypeUtil.hpp
2 /opt/trilinos/full/include/trilinos/stk_util/util/VecMap.hpp
2 /opt/trilinos/full/include/trilinos/stk_util/util/VecSet.hpp
2 /opt/trilinos/full/include/trilinos/stk_util/util/vectorization.hpp
2 /opt/trilinos/full/include/trilinos/TeuchosKokkosCompat_config.h
2 /opt/trilinos/full/include/trilinos/Thyra_MueLuPreconditionerFactory.hpp
2 /opt/trilinos/full/include/trilinos/Thyra_XpetraLinearOp.hpp
2 /opt/trilinos/full/include/trilinos/Tpetra_CrsMatrixSolveOp.hpp