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clean_workspace.py: move from atdm module for ninja to sems module

James Willenbring requested to merge prwolfe:change_ninja_module into develop

Created by: prwolfe

For whatever reason, the atdm module has a dependency on a compiler set already being loaded. Not that this is needed....

Motivation and Context

I am attempting to make sure we can rapidly and safely restart all compilation if incremental builds get locked up. Then I will test and enable incremental PR builds.

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