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1. For first-time setup you'll need to generate a personal access token (PAT) for git, see: https://gitlab.osti.gov/mtip/notes.
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1. For first-time setup you'll need to generate a personal access token (PAT) for git, see: https://gitlab.osti.gov/mtip/notes. TL;DR to configure git to use PATs:
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2. Configure git:
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```bash
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git config --global credential.helper 'store --file ~/.my-credentials'
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```
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3. Build (approx. 40 mins):
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2. Build (approx. 40 mins):
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```bash
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git clone --recursive http://gitlab.osti.gov/mtip/spinifel.git
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... | ... | @@ -15,7 +14,7 @@ |
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Note: the repository uses submodules. Either clone with `--recursive` (as above) or run `git submodule update --init` after cloning.
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4. Run interactively:
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3. Run interactively:
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```bash
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bsub -W 1:00 -nnodes 1 -alloc_flags gpumps -P CHM137 -Is /bin/bash
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DATA_DIR=/gpfs/alpine/proj-shared/chm137/data/spi DATA_FILENAME=2CEX-10k-2.h5 bsub submit_summit.sh
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```
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5. Visualize results saved to out_dir:
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4. Visualize results saved to out_dir:
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/gpfs/alpine/proj-shared/chm137/\<username\>/spinifel_output
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Download using:
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scp $USER@dtn.ccs.ornl.gov:/path/yourfile .
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... | ... | |